Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005443.1 Corchorus capsularis cultivar CVL-1 contig05461, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2819

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1061--1095
2
17.5
2
100
0
70
51
0
0
48
1.00
2043--2267
22
10.1
22
72
15
135
56
4
18
21
1.59
2048--2298
7
34.7
7
66
13
71
56
3
18
20
1.57
2065--2230
56
2.9
57
90
4
266
55
4
18
21
1.61
2239--2285
16
3.0
16
71
6
51
59
4
17
19
1.53
2264--2349
22
3.9
22
70
8
68
50
4
20
24
1.67
2416--2476
27
2.1
27
82
8
68
59
1
22
16
1.46

Tables:   1

The End!