Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005444.1 Corchorus capsularis cultivar CVL-1 contig05462, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7839

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1159--1202
22
2.0
22
100
0
88
9
13
31
45
1.75
1266--1304
2
20.0
2
94
5
71
51
0
0
48
1.00
2637--2705
31
2.2
31
87
5
95
5
15
39
39
1.72
3448--3507
16
3.8
16
93
0
102
8
13
38
40
1.75
3838--3887
2
26.0
2
84
8
59
44
0
2
54
1.11
3842--3871
15
2.0
15
93
0
51
46
0
3
50
1.18
3830--3887
23
2.5
23
80
5
73
39
1
1
56
1.19
3840--3887
17
2.8
17
90
0
69
43
0
2
54
1.12
5222--5441
114
1.9
115
90
2
354
50
4
13
32
1.61
6612--6745
17
8.1
17
85
7
168
21
11
31
35
1.90

Tables:   1

The End!