Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005448.1 Corchorus capsularis cultivar CVL-1 contig05466, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28594

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74--111
2
19.0
2
94
0
67
52
0
0
47
1.00
2615--2643
1
29.0
1
100
0
58
0
0
0
100
0.00
3281--3324
22
2.0
22
90
0
70
61
15
9
13
1.56
4272--4309
2
19.0
2
100
0
76
50
0
0
50
1.00
7312--7366
17
3.2
17
86
0
74
36
16
21
25
1.94
9043--9069
2
13.5
2
100
0
54
51
0
0
48
1.00
9569--9602
2
17.0
2
100
0
68
50
0
0
50
1.00
11615--11655
11
3.7
11
86
0
64
17
26
26
29
1.97
11596--11656
22
2.8
22
92
0
95
18
26
29
26
1.98

Tables:   1

The End!