Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005451.1 Corchorus capsularis cultivar CVL-1 contig05469, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8791

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--34
2
17.0
2
100
0
68
50
0
0
50
1.00
267--325
29
2.0
29
96
0
109
38
20
6
33
1.79
444--515
3
23.3
3
85
5
90
34
0
5
59
1.21
444--514
16
4.6
15
92
1
70
35
0
5
59
1.21
687--835
64
2.3
65
89
1
228
34
10
8
46
1.68
743--843
22
4.6
22
67
7
62
31
9
7
50
1.64
887--1102
22
9.7
22
72
14
95
39
14
10
35
1.81
1023--1102
23
3.5
23
86
1
108
38
15
8
37
1.78
1276--1582
22
13.8
22
68
13
148
35
14
10
39
1.80
1250--1443
44
4.4
44
74
6
171
36
12
8
42
1.73
1250--1443
88
2.2
87
81
8
216
36
12
8
42
1.73
1724--1811
22
4.0
21
74
8
86
36
18
10
35
1.84
2864--2900
19
1.9
19
94
0
65
64
2
5
27
1.28
3175--3248
31
2.4
31
86
6
96
50
5
14
29
1.66

Tables:   1

The End!