Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005454.1 Corchorus capsularis cultivar CVL-1 contig05472, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4938

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1277--1670
156
2.5
156
79
5
440
30
15
20
33
1.93
2000--2064
28
2.3
28
84
10
80
33
20
21
24
1.97
2383--2446
26
2.5
27
94
5
107
53
0
6
40
1.26
2453--2490
18
2.2
17
90
4
58
44
0
2
52
1.14
2367--2492
20
6.2
20
66
23
59
47
0
5
46
1.31
3423--3493
27
2.6
27
100
0
142
42
23
15
18
1.88

Tables:   1

The End!