Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005456.1 Corchorus capsularis cultivar CVL-1 contig05474, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12868

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2984--3050
33
2.0
33
88
0
98
40
14
14
29
1.87
6379--6408
10
3.0
10
100
0
60
10
60
10
20
1.57
6370--6408
20
2.0
20
89
0
60
7
64
12
15
1.49
7011--7035
13
1.9
13
100
0
50
40
8
0
52
1.31
12773--12797
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!