Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005458.1 Corchorus capsularis cultivar CVL-1 contig05476, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3317

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1816--1860
14
3.2
14
85
14
58
46
2
0
51
1.13
1753--2081
167
2.0
165
86
6
459
35
10
10
43
1.73
2096--2133
19
2.0
20
85
15
53
28
5
2
63
1.30
2302--2450
22
6.7
21
73
11
113
36
10
15
37
1.82
2303--2430
44
2.9
44
85
2
159
36
11
14
36
1.83
2302--2485
22
8.3
22
71
5
102
33
9
17
39
1.81

Tables:   1

The End!