Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005460.1 Corchorus capsularis cultivar CVL-1 contig05478, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10848

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2517--2542
12
2.2
12
100
0
52
42
0
7
50
1.31
4564--4642
25
3.1
24
82
8
77
58
0
1
40
1.06
4551--4630
21
3.8
21
75
18
76
60
0
1
38
1.05
5058--5110
22
2.3
23
76
20
58
66
1
3
28
1.20
5106--5157
25
2.1
25
100
0
104
51
0
11
36
1.38
7628--7910
149
1.9
153
90
2
457
54
3
7
35
1.45
8889--8939
23
2.2
23
82
0
66
47
17
15
19
1.83

Tables:   1

The End!