Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005461.1 Corchorus capsularis cultivar CVL-1 contig05479, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5916

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3732--3770
19
2.1
19
100
0
78
48
10
5
35
1.59
4596--4692
6
14.9
7
86
11
95
44
6
2
47
1.39
4611--4692
2
38.5
2
88
11
119
46
4
1
47
1.31
5857--5916
2
30.0
2
100
0
120
50
0
50
0
1.00

Tables:   1

The End!