Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005463.1 Corchorus capsularis cultivar CVL-1 contig05481, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18656

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30--65
18
1.9
19
88
5
56
58
8
0
33
1.28
284--330
24
2.0
24
87
8
69
44
0
19
36
1.51
2468--2514
22
2.1
23
88
4
69
57
8
2
31
1.41
2479--2527
22
2.2
22
82
7
55
59
6
2
32
1.34
2553--2677
32
3.9
32
82
9
146
17
32
29
20
1.95
2609--2658
16
3.1
16
68
21
50
24
34
24
18
1.96
2841--2884
21
2.1
21
91
0
70
27
9
43
20
1.82
3109--3152
23
2.0
21
82
8
52
40
4
4
50
1.43
4841--4872
5
6.8
5
92
7
50
62
0
0
37
0.95
18071--18323
131
1.9
131
100
0
506
20
12
26
40
1.88

Tables:   1

The End!