Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005473.1 Corchorus capsularis cultivar CVL-1 contig05491, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35366

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
896--929
3
11.3
3
100
0
68
67
0
32
0
0.91
3985--4075
45
2.0
45
95
0
164
40
19
10
28
1.86
5873--5899
4
6.8
4
100
0
54
77
0
0
22
0.76
13967--13994
7
4.0
7
100
0
56
57
42
0
0
0.99
14736--14766
13
2.4
13
100
0
62
22
48
6
22
1.73
23208--23242
1
35.0
1
100
0
70
100
0
0
0
0.00
24736--24772
2
18.5
2
100
0
74
51
0
0
48
1.00

Tables:   1

The End!