Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005476.1 Corchorus capsularis cultivar CVL-1 contig05494, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21033

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
745--772
12
2.3
12
100
0
56
32
14
25
28
1.94
6316--6360
22
2.0
22
91
0
72
51
17
4
26
1.65
13588--13704
22
5.3
21
74
12
94
39
19
8
32
1.82
13836--13883
21
2.2
22
88
7
80
31
12
8
47
1.71
13769--13878
22
5.1
21
80
10
80
32
17
11
38
1.86
14063--14141
32
2.4
34
87
8
110
41
10
13
34
1.79
14808--14856
16
3.3
16
67
21
52
46
20
4
28
1.68
15612--15718
53
2.0
53
89
3
162
26
29
15
28
1.96
15991--16018
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!