Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000548.1 Corchorus capsularis cultivar CVL-1 contig00548, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12294

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10392--10423
2
16.0
2
100
0
64
50
0
0
50
1.00
11197--11265
7
10.3
7
74
14
56
15
24
1
57
1.46
11084--11235
34
4.4
34
79
12
157
17
22
4
55
1.60
11203--11259
19
3.0
18
75
10
51
17
21
1
59
1.46
11243--11320
35
2.3
35
90
2
122
14
23
5
57
1.56
11301--11338
14
2.6
15
83
8
51
21
18
7
52
1.70
11378--11438
20
3.0
20
83
4
70
24
22
4
47
1.71
11416--11465
22
2.3
22
85
0
73
28
24
2
46
1.64
11328--11505
84
2.1
85
81
5
200
24
21
4
49
1.68
11426--11507
22
3.8
21
79
7
65
25
17
3
53
1.60
11549--11645
30
3.1
30
83
5
122
23
16
9
50
1.74
11557--11665
30
3.3
35
82
10
99
22
19
7
51
1.71

Tables:   1

The End!