Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005481.1 Corchorus capsularis cultivar CVL-1 contig05499, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4478

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2033--2118
45
1.9
45
87
0
127
25
24
16
33
1.95
3198--3238
2
22.0
2
85
14
61
48
0
0
51
1.00
3198--3243
23
2.0
24
91
8
78
50
0
0
50
1.00
3196--3260
31
2.1
31
83
11
80
49
0
1
49
1.10
3381--3423
20
2.1
21
86
4
61
20
18
20
39
1.93
3411--3493
42
2.0
43
88
7
125
36
22
16
24
1.95

Tables:   1

The End!