Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005482.1 Corchorus capsularis cultivar CVL-1 contig05500, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11848

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2633--2674
16
2.6
16
81
11
50
11
16
0
71
1.14
2645--2678
16
2.2
16
94
5
61
11
11
0
76
1.02
3662--3702
18
2.3
18
100
0
82
21
31
4
41
1.74
4694--4762
27
2.2
32
78
16
76
30
5
2
60
1.34
4719--4758
17
2.4
17
95
0
71
32
10
2
55
1.47
8625--8705
24
3.5
23
77
12
69
22
8
2
66
1.31

Tables:   1

The End!