Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005483.1 Corchorus capsularis cultivar CVL-1 contig05501, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12815

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1030--1689
198
3.3
197
87
3
844
33
12
17
35
1.88
2613--2659
6
8.3
6
81
13
55
2
2
14
80
0.89
2614--2659
11
4.2
11
88
0
74
2
2
15
80
0.91
4842--4883
18
2.3
18
83
0
57
50
4
28
16
1.66
5682--5733
24
2.1
25
86
10
72
46
0
0
53
1.00
5630--5800
64
2.6
66
89
5
251
43
2
4
50
1.34

Tables:   1

The End!