Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005490.1 Corchorus capsularis cultivar CVL-1 contig05508, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9072

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8673--8719
13
3.5
13
72
16
51
10
27
0
61
1.29
8780--8882
21
4.9
21
77
8
95
21
23
5
49
1.71
8799--8953
42
3.8
41
79
14
178
21
21
7
49
1.73
8877--9004
22
6.0
22
76
14
124
21
19
6
53
1.67
8871--9012
43
3.3
44
79
6
148
21
19
5
53
1.65
8977--9041
15
4.4
15
70
18
55
21
18
6
53
1.66
8779--8982
100
2.1
98
83
5
259
22
21
6
50
1.71
8871--9054
22
8.5
21
72
12
115
20
20
5
53
1.66
8875--9004
65
2.0
64
84
8
167
20
20
6
53
1.67

Tables:   1

The End!