Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005498.1 Corchorus capsularis cultivar CVL-1 contig05516, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21760

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34--263
78
3.1
77
90
5
330
50
0
12
37
1.43
118--263
70
2.1
70
90
0
229
50
0
12
37
1.40
1980--2014
2
17.5
2
100
0
70
48
0
0
51
1.00
4368--4402
13
2.6
14
86
13
56
22
5
20
51
1.68
7019--7152
61
2.2
63
90
5
211
29
27
8
33
1.87
15322--15381
3
20.0
3
93
6
104
35
0
0
65
0.93
16836--16933
46
2.2
42
78
13
115
59
6
12
22
1.55
20907--20952
22
2.1
22
91
0
74
23
17
10
47
1.79
21053--21105
19
2.7
19
80
8
54
50
3
9
35
1.53

Tables:   1

The End!