Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005499.1 Corchorus capsularis cultivar CVL-1 contig05517, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30994

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18165--18769
303
2.0
303
95
0
1095
35
10
14
40
1.79
25037--25074
2
19.0
2
100
0
76
50
0
0
50
1.00
27029--27095
3
23.3
3
77
17
63
37
0
0
62
0.95
27030--27095
11
6.1
11
75
20
68
37
0
0
62
0.96
27033--27095
19
3.3
19
77
20
69
38
0
0
61
0.96
27380--27460
40
2.0
40
90
0
126
43
19
11
25
1.84
30170--30199
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!