Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005507.1 Corchorus capsularis cultivar CVL-1 contig05525, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4098

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1660--1759
40
2.5
42
83
9
136
51
6
20
23
1.69
1788--2023
42
5.7
43
77
13
244
50
5
21
22
1.68
1855--1953
15
6.3
15
67
25
62
55
3
20
21
1.56
1855--1925
7
9.7
7
73
8
52
57
2
19
19
1.53
1788--1918
22
6.1
22
85
7
180
52
6
21
19
1.67
1877--1962
35
2.4
36
83
11
113
54
3
20
20
1.59
1929--2023
21
4.5
22
77
4
97
47
5
22
25
1.72
2069--2134
27
2.4
28
82
5
80
56
1
25
16
1.49

Tables:   1

The End!