Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005508.1 Corchorus capsularis cultivar CVL-1 contig05526, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6051

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1153--1203
13
4.2
13
82
14
65
70
0
15
13
1.17
1154--1198
11
3.8
12
88
11
67
68
0
15
15
1.21
1241--1294
21
2.6
21
82
2
74
46
7
16
29
1.74
1285--1315
14
2.1
15
94
5
55
32
9
6
51
1.60
1591--1656
12
5.8
12
73
22
61
74
7
0
18
1.05
1601--1656
20
2.8
20
83
8
69
75
7
0
17
1.03
1973--2033
14
4.5
13
72
24
54
80
0
11
8
0.91
1973--2032
21
2.9
20
85
5
84
80
0
11
8
0.92
1974--2046
15
4.7
16
76
14
55
78
0
13
8
0.97
3348--3424
22
3.4
22
67
22
68
29
27
22
20
1.98
3343--3451
47
2.3
47
90
3
175
30
24
21
23
1.99
3429--3472
21
2.0
22
91
4
72
27
25
22
25
2.00

Tables:   1

The End!