Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005510.1 Corchorus capsularis cultivar CVL-1 contig05528, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10760

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
798--880
41
2.0
41
97
0
157
53
4
20
21
1.64
2765--2798
16
2.1
16
88
5
50
26
17
26
29
1.98
3211--3475
131
2.0
131
97
0
503
34
13
12
39
1.82
3591--3714
16
7.7
16
72
12
85
32
36
21
9
1.86
3599--3714
32
3.7
32
83
3
146
33
36
20
9
1.85
7674--7734
31
1.9
32
96
3
115
55
3
4
36
1.38

Tables:   1

The End!