Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005512.1 Corchorus capsularis cultivar CVL-1 contig05530, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7996

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--102
51
2.0
51
96
0
184
36
18
2
41
1.66
476--514
16
2.4
16
83
8
53
0
23
2
74
0.94
2243--2281
20
2.0
20
90
10
62
41
20
7
30
1.80
2352--2385
14
2.4
14
100
0
68
44
5
20
29
1.75
3956--3991
2
18.0
2
100
0
72
50
0
0
50
1.00
5833--5866
17
2.0
17
100
0
68
41
17
11
29
1.85
6374--6409
10
3.6
10
85
14
56
50
0
0
50
1.00

Tables:   1

The End!