Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005516.1 Corchorus capsularis cultivar CVL-1 contig05534, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14826

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1289--1338
18
2.8
18
81
3
57
28
22
12
38
1.89
9436--9483
22
2.3
20
86
10
62
39
25
16
18
1.91
9403--9503
53
1.9
53
87
0
148
37
28
17
15
1.91
13405--13434
2
15.0
2
100
0
60
50
0
0
50
1.00
13960--14380
106
4.0
106
95
0
745
35
8
21
34
1.83

Tables:   1

The End!