Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005528.1 Corchorus capsularis cultivar CVL-1 contig05546, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18256

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1427--1460
6
5.7
6
96
0
59
70
0
29
0
0.87
1826--1854
6
4.8
6
100
0
58
31
0
68
0
0.89
12371--12430
31
1.9
32
89
3
95
26
25
20
28
1.99
13724--13770
2
25.0
2
79
12
55
51
0
0
48
1.00
13755--13819
30
2.1
31
94
2
114
58
9
0
32
1.30
13727--13770
11
4.0
11
80
11
54
52
0
0
47
1.00
14168--14208
14
2.9
14
86
10
57
26
0
2
70
0.99
16205--16314
51
2.2
51
93
0
184
53
8
12
25
1.66
16475--16511
17
2.2
17
90
0
56
29
13
21
35
1.92

Tables:   1

The End!