Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005529.1 Corchorus capsularis cultivar CVL-1 contig05547, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3329

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8--1466
324
4.5
325
89
4
2129
32
15
16
35
1.90
1--1466
636
2.3
641
88
3
2161
32
15
16
35
1.90
1258--1675
209
2.0
209
88
2
626
31
18
15
34
1.92
1475--3329
972
1.9
969
91
2
3033
32
15
16
35
1.91
1473--3329
649
2.9
647
90
3
2851
32
15
16
35
1.91

Tables:   1

The End!