Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005536.1 Corchorus capsularis cultivar CVL-1 contig05554, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16870

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5401--5475
36
2.1
36
100
0
150
44
16
10
29
1.81
9732--9781
2
26.5
2
80
11
61
46
2
2
50
1.24
11350--12888
147
10.6
147
77
5
1352
19
23
19
37
1.94
11350--12888
295
5.3
290
76
7
1280
19
23
19
37
1.94
13021--13051
15
2.1
15
94
5
55
19
0
25
54
1.44
13998--14035
11
3.5
11
89
10
51
39
0
2
57
1.12
14974--15099
62
2.0
62
100
0
252
38
23
9
29
1.86

Tables:   1

The End!