Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005539.1 Corchorus capsularis cultivar CVL-1 contig05557, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18041

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5171--5359
54
3.5
53
82
5
229
37
19
18
24
1.94
5171--5365
108
1.8
108
85
6
279
37
20
18
24
1.94
5472--5672
54
3.7
54
80
6
192
35
18
20
24
1.95
5082--5702
309
2.0
309
95
0
1107
32
19
21
25
1.97
5583--5835
54
4.7
53
77
4
179
32
20
20
26
1.97
5523--5722
108
1.9
107
81
6
242
36
18
21
24
1.95
12698--12936
81
3.0
81
93
0
388
30
26
20
22
1.98
15996--16021
6
4.3
6
100
0
52
19
0
19
61
1.35
17071--17144
29
2.6
29
100
0
148
32
14
10
41
1.81

Tables:   1

The End!