Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005543.1 Corchorus capsularis cultivar CVL-1 contig05561, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4113

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--339
184
1.8
184
83
2
449
27
20
16
36
1.94
179--4113
322
12.1
323
82
6
4436
32
16
16
35
1.91
179--4113
644
6.1
643
85
4
5098
32
16
16
35
1.91
3050--3122
35
2.1
35
87
2
103
32
12
16
38
1.86

Tables:   1

The End!