Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005550.1 Corchorus capsularis cultivar CVL-1 contig05568, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13976

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57--104
22
2.2
22
88
0
69
45
22
4
27
1.70
91--238
22
6.6
24
70
17
77
37
12
10
39
1.76
65--152
46
1.9
46
81
4
106
39
12
9
38
1.75
112--240
22
5.9
22
72
13
95
37
13
10
38
1.78
111--239
44
3.0
43
79
7
134
37
13
10
38
1.79
578--674
38
2.6
37
80
4
122
58
8
18
14
1.60
6780--6848
30
2.2
31
89
10
104
39
1
31
27
1.66
6780--6849
34
2.1
33
86
10
97
40
1
31
27
1.65

Tables:   1

The End!