Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005555.1 Corchorus capsularis cultivar CVL-1 contig05573, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7664

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
90--118
2
15.0
2
92
7
51
48
0
0
51
1.00
1379--1426
22
2.3
20
86
10
62
39
22
16
20
1.92
1405--1498
31
3.1
31
84
1
118
32
25
22
19
1.97
4700--4847
57
2.6
56
89
2
224
39
22
25
11
1.88
5037--5164
60
2.1
60
89
0
193
46
20
17
15
1.83
7638--7664
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!