Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005558.1 Corchorus capsularis cultivar CVL-1 contig05576, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11331

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4573--4633
24
2.3
26
81
16
81
37
31
0
31
1.58
4700--4797
39
2.8
33
76
18
106
46
9
13
30
1.74
4724--4803
39
2.1
39
92
0
133
47
12
10
30
1.74
8698--8825
42
3.0
42
96
0
229
25
11
27
35
1.90
11054--11082
3
10.0
3
92
7
51
0
31
0
68
0.89
11297--11326
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!