Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005559.1 Corchorus capsularis cultivar CVL-1 contig05577, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6632

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2646
332
8.0
331
78
7
2199
35
15
13
35
1.87
2911--3020
53
2.1
52
96
3
211
40
19
17
22
1.91
3265--3303
17
2.3
17
86
0
51
23
35
12
28
1.91
3333--3492
85
1.9
85
94
0
284
28
31
28
10
1.90
6551--6632
2
41.0
2
100
0
164
50
0
50
0
1.00

Tables:   1

The End!