Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005568.1 Corchorus capsularis cultivar CVL-1 contig05586, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4028

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24--1425
56
26.2
55
76
11
1033
27
19
5
48
1.70
27--1401
109
12.8
108
81
9
1454
27
19
5
48
1.70
3419--3465
3
15.3
3
95
4
85
34
0
0
65
0.93
3565--3613
25
1.9
26
87
4
73
46
6
12
34
1.66
3764--3798
2
18.0
2
94
5
63
51
0
0
48
1.00

Tables:   1

The End!