Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005569.1 Corchorus capsularis cultivar CVL-1 contig05587, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18916

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4886--4982
50
1.9
50
91
0
158
39
25
14
20
1.91
6724--6765
20
2.1
20
86
0
57
14
23
19
42
1.87
6824--7059
104
2.3
105
86
2
314
33
16
18
31
1.94
7603--7704
50
2.0
52
94
3
181
37
16
11
34
1.85
12471--12512
20
2.1
20
86
0
57
14
23
19
42
1.87
12572--12807
104
2.3
105
88
0
339
33
16
19
30
1.94
12572--12827
105
2.4
105
86
1
316
32
17
18
31
1.94
14158--14249
36
2.6
36
89
0
130
32
29
15
22
1.95
15976--16019
11
4.0
11
87
0
61
50
6
2
40
1.42
15972--16018
22
2.1
22
92
0
76
48
6
2
42
1.40

Tables:   1

The End!