Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005580.1 Corchorus capsularis cultivar CVL-1 contig05598, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1921

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
140--177
15
2.5
15
91
0
58
15
28
31
23
1.96
156--261
33
3.2
33
86
0
158
22
23
32
21
1.98
214--310
50
2.0
49
87
6
142
24
20
31
22
1.98
246--310
17
3.9
17
68
11
55
27
16
30
24
1.97
668--692
2
12.5
2
100
0
50
48
0
0
52
1.00
1763--1853
36
2.5
36
94
0
155
24
27
34
14
1.94

Tables:   1

The End!