Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005588.1 Corchorus capsularis cultivar CVL-1 contig05606, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12948

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--88
2
41.5
2
97
2
157
0
50
0
50
1.00
6231--6261
15
2.0
16
93
6
55
64
19
0
16
1.29
10210--10419
106
2.0
106
88
3
316
35
20
28
16
1.94
11489--12505
332
3.1
330
87
3
1393
35
17
14
32
1.91
12261--12732
246
1.9
247
88
3
720
33
17
15
33
1.91

Tables:   1

The End!