Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005596.1 Corchorus capsularis cultivar CVL-1 contig05614, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8981

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
343--421
6
12.3
6
71
26
56
31
46
17
3
1.66
344--404
16
3.8
16
82
0
68
34
45
16
3
1.63
344--404
32
1.9
32
86
0
86
34
45
16
3
1.63
377--421
16
2.7
17
89
6
74
26
53
17
2
1.56
1857--1886
15
2.0
15
93
0
51
43
13
10
33
1.77
2299--2384
33
2.6
33
82
8
97
39
22
8
30
1.83
5090--5146
30
1.9
30
89
7
89
24
28
15
31
1.96
5974--6022
24
2.0
24
88
0
71
30
12
24
32
1.92

Tables:   1

The End!