Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005599.1 Corchorus capsularis cultivar CVL-1 contig05617, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5107

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
397--444
21
2.3
21
88
0
78
56
6
8
29
1.53
530--631
9
11.8
9
66
26
51
9
18
36
35
1.84
552--662
16
6.9
16
75
8
109
9
18
38
33
1.83
549--662
32
3.6
32
86
4
135
8
19
38
33
1.82
3203--3381
82
2.2
83
91
1
288
33
17
20
28
1.95
3368--3463
32
3.0
32
79
10
83
26
25
26
22
2.00
4243--4281
15
2.6
15
87
0
60
2
38
10
48
1.51
4561--4639
29
2.7
29
78
18
92
22
8
22
45
1.80

Tables:   1

The End!