Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005602.1 Corchorus capsularis cultivar CVL-1 contig05620, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8664

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1272--1324
25
2.1
25
89
0
79
11
26
7
54
1.62
1491--1524
17
2.0
17
100
0
68
35
17
17
29
1.93
1783--1820
8
4.8
8
100
0
76
13
10
36
39
1.79
8594--8618
4
6.2
4
100
0
50
76
0
0
24
0.80
8631--8664
2
17.0
2
100
0
68
50
0
0
50
1.00

Tables:   1

The End!