Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005607.1 Corchorus capsularis cultivar CVL-1 contig05625, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7327

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
485--535
13
4.1
12
78
12
50
80
0
19
0
0.71
542--646
45
2.3
45
91
3
167
39
6
18
36
1.77
1042--1095
26
2.0
26
85
3
72
61
0
24
14
1.34
1385--1440
26
2.1
27
83
12
71
76
0
21
1
0.87
1385--1442
21
2.8
21
84
10
75
75
0
22
1
0.89
1998--2053
28
2.0
29
92
3
96
37
19
12
30
1.89
2282--2429
69
2.1
69
83
2
190
24
30
19
25
1.98
2659--2690
11
2.9
11
90
0
55
37
0
18
43
1.51
6566--6607
12
3.6
12
77
3
50
7
11
4
76
1.15
7031--7071
21
2.0
21
85
9
57
24
9
21
43
1.83

Tables:   1

The End!