Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005623.1 Corchorus capsularis cultivar CVL-1 contig05641, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2002

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1377--1435
28
2.1
28
83
0
73
27
10
23
38
1.87
1217--1769
35
15.3
35
68
13
194
32
7
19
39
1.81
1448--1551
43
2.5
43
84
9
126
35
8
20
35
1.83
1527--1579
28
1.9
28
88
3
81
32
13
18
35
1.90
1253--1851
148
4.1
148
91
3
939
33
7
19
39
1.81
1662--1724
28
2.2
28
82
0
72
33
9
22
34
1.86
1593--1702
43
2.6
44
85
8
147
35
8
20
36
1.82
1672--1730
28
2.1
28
90
0
91
30
10
22
37
1.87

Tables:   1

The End!