Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005638.1 Corchorus capsularis cultivar CVL-1 contig05656, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5681

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
585--627
23
1.9
22
90
4
68
25
9
0
65
1.22
597--659
27
2.2
28
86
10
85
28
6
1
63
1.28
3211--3239
15
1.9
15
100
0
58
13
0
37
48
1.43
3788--3852
16
4.1
16
74
4
69
55
6
23
15
1.62
3848--3874
14
1.9
14
100
0
54
74
3
14
7
1.18
3825--3926
40
2.7
38
84
6
136
59
4
17
17
1.54
4020--4080
28
2.1
28
85
8
79
54
6
24
14
1.64
4118--4175
21
2.7
21
83
2
71
50
6
22
20
1.72
4255--4314
28
2.2
27
85
8
77
56
1
25
16
1.49
5534--5585
3
17.3
3
84
7
70
59
0
38
1
1.08

Tables:   1

The End!