Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005644.1 Corchorus capsularis cultivar CVL-1 contig05662, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13292

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
931--969
16
2.5
16
87
4
53
56
28
7
7
1.55
1123--1193
32
2.2
32
92
0
115
38
36
9
15
1.81
1326--1353
7
4.0
7
100
0
56
14
28
28
28
1.95
3500--3544
4
11.8
4
92
4
67
0
17
0
82
0.68
3492--3554
12
5.0
12
76
16
65
0
15
0
84
0.63
3492--3546
8
7.2
8
86
10
62
0
14
0
85
0.60
7276--7307
15
2.1
15
100
0
64
25
6
21
46
1.74
10038--10460
58
7.0
58
84
10
515
27
17
21
33
1.96
10210--10495
67
4.4
67
81
9
378
26
17
20
35
1.95
10209--10494
125
2.2
129
89
5
436
26
17
20
35
1.95

Tables:   1

The End!