Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005652.1 Corchorus capsularis cultivar CVL-1 contig05670, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7220

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
662--701
2
20.5
2
94
5
73
50
0
0
50
1.00
3253--3287
6
5.8
6
100
0
70
17
31
34
17
1.93
5702--5747
22
2.1
22
88
8
67
0
6
17
76
1.00
5718--5747
11
2.7
11
94
0
51
0
3
16
80
0.85
5709--5742
15
2.2
15
89
5
50
0
5
17
76
0.98
6886--6910
13
1.9
13
100
0
50
48
12
0
40
1.40

Tables:   1

The End!