Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005653.1 Corchorus capsularis cultivar CVL-1 contig05671, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3076

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--813
324
2.5
325
90
2
1278
31
15
15
36
1.90
550--1081
268
2.0
267
92
1
886
29
16
14
38
1.89
817--2038
325
3.8
321
86
5
1681
31
14
15
38
1.88
2184--2801
31
19.9
32
78
8
536
29
31
28
10
1.90
2163--2333
63
2.7
64
81
4
204
31
32
26
8
1.87
2810--2880
32
2.2
32
85
5
90
23
33
30
11
1.90
2900--3020
32
3.8
32
85
6
156
28
30
27
13
1.94
2900--3020
63
1.9
63
84
3
163
28
30
27
13
1.94

Tables:   1

The End!