Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005672.1 Corchorus capsularis cultivar CVL-1 contig05690, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2458

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11--375
39
9.4
39
73
15
249
50
6
16
26
1.69
79--138
19
3.2
18
70
11
57
55
3
13
28
1.54
11--288
79
3.6
77
80
9
244
52
6
15
26
1.66
504--544
19
2.2
19
86
4
57
46
0
29
24
1.53
505--634
44
2.9
44
74
13
131
53
1
23
20
1.54
544--582
18
2.2
18
90
9
62
58
2
23
15
1.49
2182--2216
14
2.4
15
85
9
54
65
5
8
20
1.40
2234--2270
6
6.3
6
90
3
58
48
13
2
35
1.57

Tables:   1

The End!