Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005679.1 Corchorus capsularis cultivar CVL-1 contig05697, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3447

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1288--1335
24
2.0
24
100
0
96
33
20
20
25
1.97
2311--2571
31
8.5
31
78
9
243
36
19
19
24
1.95
2315--2539
60
3.7
59
83
5
256
36
20
19
23
1.95
2311--2571
60
4.3
60
82
7
251
36
19
19
24
1.95
2603--2762
60
2.7
59
86
3
196
26
17
20
36
1.94
2663--2766
31
3.4
29
77
15
113
25
18
20
35
1.95
2901--2951
19
2.7
19
93
0
84
37
13
15
33
1.87

Tables:   1

The End!