Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005680.1 Corchorus capsularis cultivar CVL-1 contig05698, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1938

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
135--167
15
2.3
15
89
5
50
57
6
9
27
1.53
188--214
6
4.5
6
100
0
54
55
14
0
29
1.40
211--255
13
3.5
13
90
3
74
55
8
13
22
1.65
211--263
25
2.1
25
89
6
81
58
9
11
20
1.60
1306--1494
94
2.0
94
97
0
360
29
18
26
25
1.98
1691--1724
11
3.1
11
86
0
50
44
20
0
35
1.52

Tables:   1

The End!