Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005686.1 Corchorus capsularis cultivar CVL-1 contig05704, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2898

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
952--1291
70
4.8
70
89
2
475
37
21
19
22
1.94
954--1291
141
2.4
140
88
1
471
37
21
18
22
1.94
1282--1386
36
2.9
36
80
1
131
42
25
17
14
1.86
1361--1527
70
2.4
71
90
1
273
39
21
17
21
1.92
1500--1589
36
2.5
35
81
1
99
43
28
15
12
1.83
1554--1671
50
2.4
50
88
1
175
38
24
16
21
1.93
1732--1857
35
3.6
35
82
2
146
43
19
19
18
1.88
1733--1901
35
5.0
34
78
11
134
40
18
19
20
1.91
1841--1897
29
2.0
29
96
0
105
38
15
21
24
1.92
2863--2893
15
2.0
16
93
6
55
0
16
0
83
0.64

Tables:   1

The End!